Documentation

parseChronOperation :: Parser ChronOperation Source #

parseTimetravelSourcePath :: Parser FilePath Source #

parseTimetravelChronPath :: Parser FilePath Source #

parseChronOutPath :: Parser FilePath Source #

parseChronUpdatePath :: Parser FilePath Source #

parseMaybePoseidonVersion :: Parser (Maybe Version) Source #

parseDebugMode :: Parser LogMode Source #

parseLogMode :: Parser LogMode Source #

parseTestMode :: Parser TestMode Source #

parseErrorLength :: Parser ErrorLength Source #

parseRemoveOld :: Parser Bool Source #

parseChecksumsToRectify :: Parser ChecksumsToRectify Source #

parseMaybePackageVersionUpdate :: Parser (Maybe PackageVersionUpdate) Source #

parseVersionComponent :: Parser VersionComponent Source #

parseNoChecksumUpdate :: Parser Bool Source #

parseMaybeContributors :: Parser (Maybe [ContributorSpec]) Source #

parseContributors :: Parser [ContributorSpec] Source #

readContributorString :: String -> Either String [ContributorSpec] Source #

parseMaybeLog :: Parser (Maybe String) Source #

parseLog :: Parser String Source #

parseForce :: Parser Bool Source #

parseForgeEntityInputs :: Parser [EntityInput SignedEntity] Source #

parseFetchEntityInputs :: Parser [EntityInput PoseidonEntity] Source #

parseIgnorePoseidonVersion :: Parser Bool Source #

parseForgeEntitiesDirect :: Parser SignedEntitiesList Source #

parseFetchEntitiesDirect :: Parser EntitiesList Source #

parseForgeEntitiesFromFile :: Parser FilePath Source #

parseFetchEntitiesFromFile :: Parser FilePath Source #

parseIntersect :: Parser Bool Source #

parseRemoteDummy :: Parser () Source #

parseOutGenotypeFormat :: Bool -> Parser GenotypeFormatSpec Source #

parseGenoDataSources :: Parser [GenoDataSource] Source #

parseGenoDataSource :: Parser GenoDataSource Source #

parseRepoLocation :: Parser RepoLocationSpec Source #

parseArchiveEndpoint :: Parser ArchiveEndpoint Source #

parseValidatePlan :: Parser ValidatePlan Source #

parseInPoseidonYamlFile :: Parser FilePath Source #

parseInJannoFile :: Parser FilePath Source #

parseInSSFile :: Parser FilePath Source #

parseInBibFile :: Parser FilePath Source #

parseBasePaths :: Parser [FilePath] Source #

parseBasePath :: Parser FilePath Source #

parseInGenoWithoutSNPSet :: Parser GenotypeDataSpec Source #

parseInGenotypeDataset :: Parser GenotypeDataSpec Source #

type GenoInput = (GenotypeFormatSpec, FilePath, FilePath, FilePath) Source #

parseInGenoOne :: Parser GenoInput Source #

parseInGenoSep :: Parser GenoInput Source #

parseInGenotypeFormat :: Parser GenotypeFormatSpec Source #

parseInGenoFile :: Parser FilePath Source #

parseInSnpFile :: Parser FilePath Source #

parseInIndFile :: Parser FilePath Source #

parseGenotypeSNPSet :: Parser (Maybe SNPSetSpec) Source #

parseOutPackagePath :: Parser FilePath Source #

parseMaybeOutPackagePath :: Parser (Maybe FilePath) Source #

parseMaybeOutPackageName :: Parser (Maybe String) Source #

parseForgeOutMode :: Parser ForgeOutMode Source #

parseOutOnlyGenoFlag :: Parser ForgeOutMode Source #

parseOutOnlyGenoSwitch :: Parser Bool Source #

onlyGenoOutputDocu :: Mod FlagFields a Source #

parseMinimalOutputFlag :: Parser ForgeOutMode Source #

parseMinimalOutputSwitch :: Parser Bool Source #

minimalOutputDocu :: Mod FlagFields a Source #

parsePreservePymlFlag :: Parser ForgeOutMode Source #

parsePackageWise :: Parser Bool Source #

parseMaybeSnpFile :: Parser (Maybe FilePath) Source #

parseListEntity :: Parser ListEntity Source #

parseRawOutput :: Parser Bool Source #

parseOnlyLatest :: Parser Bool Source #

parseIgnoreGeno :: Parser Bool Source #

parseFullGeno :: Parser Bool Source #

parseNoExitCode :: Parser Bool Source #

parseIgnoreDuplicates :: Parser Bool Source #

parseRemoteURL :: Parser String Source #

parseUpgrade :: Parser Bool Source #

parseInputPlinkPopMode :: Parser PlinkPopNameMode Source #

parseOutputPlinkPopMode :: Parser PlinkPopNameMode Source #

readPlinkPopName :: String -> Either String PlinkPopNameMode Source #

parseMaybeZipDir :: Parser (Maybe FilePath) Source #

parsePort :: Parser Int Source #

parseIgnoreChecksums :: Parser Bool Source #

parseMaybeCertFiles :: Parser (Maybe (FilePath, [FilePath], FilePath)) Source #

parseKeyFile :: Parser FilePath Source #

parseChainFile :: Parser FilePath Source #

parseCertFile :: Parser FilePath Source #

parseArchiveBasePaths :: Parser [(String, FilePath)] Source #

parseMaybeArchiveName :: Parser (Maybe String) Source #

parseJannocoalSourceSpec :: Parser JannoSourceSpec Source #

parseJannocoalTargetFile :: Parser FilePath Source #

parseJannocoalOutSpec :: Parser (Maybe FilePath) Source #

parseJannocoalJannoColumns :: Parser CoalesceJannoColumnSpec Source #

parseJannocoalOverride :: Parser Bool Source #

parseJannocoalSourceKey :: Parser String Source #

parseJannocoalTargetKey :: Parser String Source #

parseJannocoalIdStripRegex :: Parser (Maybe String) Source #

parseOutputOrdered :: Parser Bool Source #