poseidon-hs-1.6.3.0: A package with tools for working with Poseidon genotype data

Safe Haskell	Safe-Inferred
Language	Haskell2010

Poseidon.CLI.Rectify

Documentation

runRectify :: RectifyOptions -> PoseidonIO () Source #

data RectifyOptions Source #

Constructors

RectifyOptions
Fields _rectifyBaseDirs :: [FilePath] _rectifyIgnorePoseidonVersion :: Bool _rectifyPoseidonVersion :: Maybe Version _rectifyPackageVersionUpdate :: Maybe PackageVersionUpdate _rectifyChecksums :: ChecksumsToRectify _rectifyNewContributors :: Maybe [ContributorSpec] _rectifyJannoRemoveEmptyCols :: Bool _rectifyOnlyLatest :: Bool

data PackageVersionUpdate Source #

Constructors

PackageVersionUpdate
Fields _pacVerUpVersionComponent :: VersionComponent _pacVerUpLog :: Maybe String

data ChecksumsToRectify Source #

Constructors

ChecksumNone
ChecksumAll
ChecksumsDetail
Fields _rectifyChecksumGeno :: Bool _rectifyChecksumJanno :: Bool _rectifyChecksumSSF :: Bool _rectifyChecksumBib :: Bool